Department of

Bioengineering

Engineering innovative solutions to modern problems in medicine and biology


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Mechanobiology Research Area

mechanobiologyMechanobiology is the understanding of biology from the perspective of mechanics. This field is important in the understanding of how molecules move things in cells, how cells know when and how much to differentiate, and where cells migrate to. It is also important on the tissue and organ level because forces define much of the organization of cells.  Many pathologies such as atherosclerosis, cancer, neurological and developmental diseases can be traced to abnormal mechanics. Recently, investigators are using forces to drive the formation of artificially-grown tissue in a field known as tissue engineering. 

This webpage highlights the activities of researchers  at Penn State in the area of mechanobiology at levels ranging from single molecules to artificial organs. 

Research Topics

Molecular Motors

Kinesins convert chemical energy from ATP into mechanical work to transport of material through out the cell. Investigators in Penn State Bioengineering employ optical techniques such as total internal reflection fluorescence microscopy (TIRFM), optical trapping, and molecular biology to tease out the precise mechanisms of this mechanochemical conversion. Similar phenomenon occur in other motors such as myosins and dyneins. Hancock Lab, Jackson Lab, Williams Lab, Cyr Lab, Catchmark Lab


Membranes

Membranes form the solvent in which many cellular proteins sit. Researchers at Penn State are interested in the precise relationship between forces and molecular dynamics, the use of membranes as tools to deliver drugs, and the role of membranes in controlling cell function. Butler Lab, Weiss Lab, Du Lab, Sheets Lab


Cell Adhesion

Forces govern the interaction of ligands with receptors,. This is an important are in immune cell recognition, cancer metastases, and adhesion of leukocytes to endothelial cells. Dong Lab, Lipowsky Lab


Cell Mechanics and Mechanotransdcution

Cell mechanics is important in defining the relationship between force and cell function. Investigators at Penn State use models and experiments to characterize moduli that define force and deformation at the molecular and cellular level. This resaerhc has applications to acrdiovascular disease, bone remodeling, and inflammation. Butler Lab, Dong Lab, Donahue Lab


Microvascular Hemodynamics

Cell mechanics plays a major role in perfusion of the small blood vessels. Many diseases can be traces to abnormalities in red blood cell mechanics such as sickle cell disease and diabetes. Investigators at Penn State have a long history of investigating the relationship between cell mechanism, and microvascular blood flow. Lipowsky Lab, Dong Lab, Butler Lab


Cardiovascular Fluid Dynamics

Fluid flow and the attendant forces on cells govern flow through artificial hearts, left ventricular assist devices, and around valves. Investigators are interested in the role of fluid mechanics on the function of artificial organs and on blood damage. Manning Lab, Deutch Lab, Weiss Lab

List of Courses

ME 461 Finite Elements in Engineering

BIOE 503 (CH E 503) Fluid Mechanics of Bioengineering Systems

BIOE 505 Bioengineering Mechanics

BIOE 512 Cell and Molecular Bioengineering

BIOE 515 Cell Mechanics and Biophysics

BIOE 520 Biophotonics

BIOE 597 Special Topics: Mechanobiology

Students at project showcase.

Feature Story

Molecular Dynamics of Lipoid Dyes in Membranes

Single molecule spectroscopic techniques and fluorescent carbocyanine dyes are used extensively to infer dynamics of native membrane lipids. 

Read More
However, the precise distribution and orientation of the dye in a bilayer and how well the dye dynamics mimic native lipid dynamics is not known. Thus, we simulated a fully-hydrated lipid bilayer comprised of 128 DPPC molecules and 0, 2, or 4 DiI molecules. These studies provide the first atomic, molecular, and intermolecular scale analysis of this popular dye and provide important quantitative parameters to help interpret fluorescence lifetimes and diffusion measurements obtained from time-resolved florescence correlation spectroscopy (FCS). Link

 

Latest News

July 9 - 13

The Department of Bioengineering welcomes to Penn State the 13th International Congress of Biorheology and 6th International Conference on Clinical Hemorheology [include picture from Biorheology home page).  We look forward to this exciting assembly of researchers from around the world to discuss the role of fluid and solid mechanics in cardiovascular health and disease.  Full Story